Publications

Patents

D, Macku, System for mechanical circulation support– PDF download.

Schmidt Ralf, Harris Matthew, Novak Daniel, Perkuhn Michael, Atrial Fibrillation Detection, WO2008007236, 2008

Publications 2024

I Varga, E Bakstein, G Gilmore, J May, D Novak, Statistical segmentation model for accurate electrode positioning in Parkinson’s deep brain stimulation based on clinical low-resolution image data and electrophysiology, Plos one 19 (3)

D. Novak, A Serious Game (MyDiabetic) to Support Children’s Education in Type 1 Diabetes Mellitus: Iterative Participatory Co-Design and Feasibility Study , JMIR SERIOUS GAMES

McWhinney SR, Hlinka J, Bakstein E, at al, Principal component analysis as an efficient method for capturing multivariate brain signatures of complex disorders-ENIGMA study in people with bipolar disorders and obesity. Hum Brain Mapp.  Jun 1;45(8)

Kang C, Prokop J, Tong L, Zhou H, Hu Y, Novak D. InA: Inhibition Adaption on pre-trained language models. Neural Networks, 25;178

Kang, D. Novak, K. Urbanova, Y. Cheng and Y. Hu, “Domain-Specific Improvement on Psychotherapy Chatbot Using Assistant,” 2024 IEEE International Conference on Acoustics, Speech, and Signal Processing Workshops (ICASSPW), Seoul, Korea, Republic of, 2024, pp. 351-355 

Publications 2023

Nováková L, Anýž J, Forejtová Z, Rošíková T, Věchetová G, Sojka P, Růžička E, Serranová T. Increased Frequency of Self-Reported Obsessive-Compulsive Symptoms in Patients with Functional Movement Disorders. Mov Disord Clin Pract. 2023 Jun 26;10(9):1341-

Forejtová Z, Serranová T, Sieger T, et al. The complex syndrome of functional neurological disorder. Psychological Medicine. 2023;53(7):3157-31671348.

 X. Yao, Z. Zhu, C. Kang, et al. AdaD-FNN for Chest CT-Based COVID-19 Diagnosis. IEEE Transactions on Emerging Topics in Computational Intelligence. 2023, 7(1), 5-14.

C. Kang, D. Novak, X. Yao, J. Xie and Y. Hu, “Classifying and Scoring Major Depressive Disorders by Residual Neural Networks on Specific Frequencies and Brain Regions,” in IEEE Transactions on Neural Systems and Rehabilitation Engineering, vol. 31, pp. 2964-2973, 2023, doi: 10.1109/TNSRE.2023.3293051.

Kang, C.; Yao, X.; Novak, D. Fuzzy Windows with Gaussian Processed Labels for Ordinal Image Scoring Tasks. Appl. Sci. 2023, 13, 4019. https://doi.org/10.3390/app13064019

Publications 2022

Kulhánek A, Lukavska K, Gabrhelík R, Novák D, Burda V, Prokop J, Holter MTS, Brendryen H
Comparing Reminders Sent via SMS Text Messaging and Email for Improving Adherence to an Electronic Health Program: Randomized Controlled Trial JMIR Mhealth Uhealth 2022;10(3):e31040  doi: 10.2196/31040

Burda V, Mráz M, Schneider J, Novák D  Managing Diabetes Using Mobiab: Long-Term Case Study of the Impact of a Mobile App on Self-management  JMIR Diabetes 2022;7(2):e36675  doi: 10.2196/36675 

Schneider J, Bakštein E, Kolenič M, Vostatek P, Correll CU, Novák D, Španiel F. Motor Activity Patterns Can Distinguish Between Inter- Episode Bipolar Disorder Patients and Healthy Controls. CNS Spectrums. 2022, 30(11), 1-32. ISSN 1092-8529. DOI 10.1017/S1092852920001777.

Jakub Schneider, Eva Fárková & Eduard Bakštein (2022) Human chronotype: Comparison of questionnaires and wrist-worn actigraphy, Chronobiology International, 39:2, 205-220, DOI: 10.1080/07420528.2021.1992418

Slovák M, Anýž J, Erlebach J, Sieger T, Forejtová Z, Fabián V, Rošíková T, Nováková L, Růžička E, Edwards MJ, Serranová T. Emotional arousal in patients with functional movement disorders: A pupillometry study. J Psychosom Res. 2022

Publications 2021

Anýž J, Bakštein E, Dally A, Kolenič M, Hlinka J, Hartmannová T, Urbanová K, Correll CU, Novák D, Španiel F, Validity of the Aktibipo Self-rating Questionnaire for the Digital Self-assessment of Mood and Relapse Detection in Patients With Bipolar Disorder: Instrument Validation Study, JMIR Ment Health 2021;8(8):e26348, doi: 10.2196/26348

Šmelko, A., Kratochvíl, M., Kruliš, M., Sieger, T., et al. GPU-Accelerated Mahalanobis-Average Hierarchical Clustering Analysis. In: Euro-Par 2021: Parallel Processing. Lisabon, 2021-08-30/2021-09-03. Cham: Springer, 2021. p. 580-595. Lecture Notes in Computer Science. vol. 12820. ISSN 0302-9743. ISBN 978-3-030-85664-9. DOI 10.1007/978-3-030-85665-6_36

Kretzler L, Große S, Wiedemann S, Wunderlich C, Nowak C, Riedel C, Sieger T, Schoen S., et al. The effects of interventional mitral valve repair using the MitraClip System on the results of pulmonary function testing, pulmonary pressure and diffusing capacity of the lung. BMC Cardiovascular Disorders. 2021, 21(235), ISSN 1471-2261. DOI 10.1186/s12872-021-02042-1

Modrák M, Bürkner P-C, Sieger T, et al. Disease progression of 213 patients hospitalized with Covid-19 in the Czech Republic in March–October 2020: An exploratory analysis. PLoS ONE. 2021, 16(10), ISSN 1932-6203. DOI 10.1371/journal.pone.0245103. Available from: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0245103

Varga, I., E. Bakstein, and D. Novak, eds. Subthalamic Nucleus Segmentation for Parkinsons Disease. Berkeley: International Society for Magnetic Resonance in Medicine, 2021

Varga, I., H. Solmoon, and P. Wah-so, eds. Mouse Brain Extraction: Comparing Graph-Cuts With 3D-UNET Convolutional Neural Networks 2021. Berkeley: International Society for Magnetic Resonance in Medicine, 2021

Varga, I., H. solmoon, and P. Wah-so, eds. A comparison of three whole brain segmentation methods for in vivo manganese enhanced MRI in animal models of Alzheimer’s disease. Berkeley: International Society for Magnetic Resonance in Medicine, 2021. Available from: https://www.ismrm.org/21m/

Lukavská K, Burda V, Lukavský J, Slussareff M, Gabrhelík R. School-Based Prevention of Screen-Related Risk Behaviors during the Long-Term Distant Schooling Caused by COVID-19 Outbreak. International Journal of Environmental Research and Public Health. 2021, 18(16), ISSN 1660-4601. DOI 10.3390/ijerph18168561. Available from: https://www.mdpi.com/1660-4601/18/16/8561/htm

Dusek P, Lescinskij A, Ruzicka F, Acosta-Cabronero J, Bruha R, Sieger T, Hajek M, Dezortova M. . Associations of Brain Atrophy and Cerebral Iron Accumulation at MRI with Clinical Severity in Wilson Disease. Radiology. 2021, 299(3), 662-672. ISSN 0033-8419. DOI 10.1148/radiol.2021202846

Novak, P. Můj Druhý Hlas (I když nemluvím, tak se domluvím). In: GEORGI, H., ed. Stárnutí 2021 (5. Gerontologická Mezioborová Konference, Praha). Stárnutí 2021, Praha, 2021-02-11/2021-02-12. Praha: Pražská vysoká škola psychosociálních studií, 2021. p. 128-136. ISSN 2695-110X. ISBN 978-80-906237-4-3. Available from: https://konferencestarnuti.cz/files/Starnuti_2021_sbornik.pdf

Uhlířová J, Šebestová L, Fišer K, Sieger T, Fišerová J, Hozák P. Nucleoporin TPR Affects C2C12 Myogenic Differentiation via Regulation of Myh4 Expression. Cells. 2021, 10(6), ISSN 2073-4409. DOI 10.3390/cells10061271. Available from: https://doi.org/10.3390/cells10061271

Prokop, J. Future directions in natural language processing applications in smoking cessation therapy. Adiktologie. 2021, 21(1), 51-57. ISSN 1213-3841. DOI 10.35198/01-2021-001-0003

Žeglitz, J., P. Posik. Benchmarking state-of-the-art symbolic regression algorithms. Genetic Programming and Evolvable Machines. 2021, 22(1), 5-33. ISSN 1573-7632. DOI 10.1007/s10710-020-09387-0. Available from: https://link.springer.com/article/10.1007/s10710-020-09387-0

Publications 2020

Cuesta-Frau D, Schneider J, Bakštein E, Vostatek P, Spaniel F, Novák D. Classification of Actigraphy Records from Bipolar Disorder Patients Using Slope Entropy: A Feasibility Study. Entropy. 2020, 22(11), ISSN 1099-4300. DOI 10.3390/e22111243. Dostupné z: https://www.mdpi.com/1099-4300/22/11/1243

Kozáková E, Bakštein E, Havlíček O, Bečev O, Knytl P, Zaytseva Y, Španiel F.. Disrupted Sense of Agency as a State Marker of First-Episode Schizophrenia: A Large-Scale Follow-Up Study. Frontiers in Psychiatry. 2020, 11 ISSN 1664-0640. DOI 10.3389/fpsyt.2020.570570. Dostupné z: https://www.frontiersin.org/articles/10.3389/fpsyt.2020.570570/full

Varga, I., Bakstein, E., Gilmore, G., Novak, D. Image-Based Subthalamic Nucleus Segmentation for Deep Brain Surgery with Electrophysiology Aided Refinement. In: SYEDA-MAHMOOD, T. et al., eds. Multimodal Learning for Clinical Decision Support and Clinical Image-Based Procedures. CLIP 2020, ML-CDS 2020. 9th MICCAI workshop on Clinical Image-based Procedures (CLIP), Lima, 2020-10-04. Springer, Cham, 2020. s. 34-43. Lecture Notes in Computer Science. sv. 12445. ISSN 0302-9743. ISBN 978-3-030-60945-0. DOI 10.1007/978-3-030-60946-7_4.

Colás A, Varela M, Mraz M, Novak D, Cuesta-Frau D, Vigil L, Benes M, Pelikanova T, Haluzik M, Burda V, Vargas B. Influence of glucometric ‘dynamical’ variables on duodenal‐jejunal bypass liner (DJBL) anthropometric and metabolic outcomes. Diabetes/Metabolism Research and Reviews. 2020, 36(4), ISSN 1520-7560. DOI 10.1002/dmrr.3287. Dostupné z: https://onlinelibrary.wiley.com/doi/10.1002/dmrr.3287

Kang, C., Y. Li a D. Novak. Brain Networks of Maintenance, Inhibition and Disinhibition During Working Memory. IEEE Transactions on Neural Systems and Rehabilitation Engineering. 2020, 2020(7), 1518-1527. ISSN 1534-4320. DOI 10.1109/TNSRE.2020.2997827.

Kratochvíl M, Bednárek D, Sieger T, Fišer K, Vondrášek J. ShinySOM: Graphical SOM-based analysis of single-cell cytometry data. Bioinformatics. 2020, 36(10), 3288-3289. ISSN 1367-4803. DOI 10.1093/bioinformatics/btaa091.

Publications 2019

Novak P. Asistivní a medicínské technologie a pomůcky. [Nepublikovaná přednáška] Katedra elektrotechniky a automatizace. 2019-03-20.

David Cuesta-Frau, Daniel Novák, Vacláv Burda, et al. Influence of duodenal-jejunal implantation on glucose dynamics: A pilot study using different nonlinear methods. Complexity. 2019, 2019 ISSN 1076-2787. DOI 10.1155/2019/6070518.

Fárková E, Schneider J, Šmotek M, Bakštein E, et al. Weight loss in conservative treatment of obesity in women is associated with physical activity and circadian phenotype: a longitudinal observational study. BioPsychoSocial Medicine. 2019, 13(1), ISSN 1751-0759. DOI 10.1186/s13030-019-0163-2. Dostupné z: https://link.springer.com/article/10.1186/s13030-019-0163-2

Farkova, E. Schneider J, Bakstein E, Koprivova J. Objectivization of chrono-biological parameters using actigraphy. In: CHOKROVERTY, S., ed. Sleep Medicine – World Sleep 2019. World Sleep 2019, Vancouver, 2019-09-20/2019-09-25. New Orleans: Elsevier, 2019. s. 110. sv. 64. ISSN 1389-9457. DOI 10.1016/j.sleep.2019.11.301.

Serranová T, Sieger T, Růžička F, Bakštein E, Dušek P, Vostatek P, Novák D, Růžička E, Urgošík D, Jech R. et al. Topography of emotional valence and arousal within the motor part of the subthalamic nucleus in Parkinson’s. Scientific Reports. 2019, 9(1), ISSN 2045-2322. DOI 10.1038/s41598-019-56260-x. Dostupné z: https://www.nature.com/articles/s41598-019-56260-x

Klempíř, Ondřej, Krupička, Radim, Bakštein, Eduard and Jech, Robert. Identification of Microrecording Artifacts with Wavelet Analysis and Convolutional Neural Network: An Image Recognition Approach. Measurement Science Review. 2019, 19(5), 222-231. ISSN 1335-8871. DOI 10.2478/msr-2019-0029.

Hanzlíková Z, Kofler M, Slovák M, Věchetová G, Fečíková A, Kemlink D, Sieger T, et al. Prepulse Inhibition of the Blink Reflex Is Abnormal in Functional Movement Disorders. MOVEMENT DISORDERS. 2019, 34(7), 1022-1030. ISSN 0885-3185. DOI 10.1002/mds.27706.

Nemy, M. et al. Cholinergic white matter pathways, cerebrovascular disease, and cognition in normal aging. In: Alzheimer’s & Parkinson’s Diseases Congress Book of Abstracts. The 14th International Conference on Alzheimer’s & Parkinson’s Diseases, Lisbon, 2019-03-26/2019-03-31. Geneva: AD/PD 2019 Kenes International Organizers of Congresses S.A., 2019.

Žeglitz, J., P. Posik Symbolic regression in dynamic scenarios with gradually changing targets. Applied Soft Computing. 2019, 2019(83), ISSN 1568-4946. DOI 10.1016/j.asoc.2019.105621.

Fišerová J, Maninová M, Sieger T et al. Nuclear pore protein TPR associates with lamin B1 and affects nuclear lamina organization and nuclear pore distribution. Cellular and Molecular Life Sciences. 2019, 76(11), 2199-2216. ISSN 1420-682X. DOI 10.1007/s00018-019-03037-0.

Hanuška J, Rusz J, Bezdicek O, Ulmanová O, Bonnet C, Dušek P, Ibarburu V, Nikolai T, Sieger T, Šonka K, Růžička E. Eye movements in idiopathic rapid eye movement sleep behaviour disorder: High antisaccade error rate reflects prefrontal cortex dysfunction. Journal of Sleep Research. 2019, 28(5), ISSN 0962-1105. DOI 10.1111/jsr.12742.

Anyz, J. et al. Examination of the Spatial Structure of Pigs’ Melanoma in Tissue Sections Based on Histology and Mass Spectrometry. In: Lhotska, L. et al., eds. World Congress on Medical Physics and Biomedical Engineering 2018 (Vol. 1). World Congress on Medical Physics and Biomedical Engineering 2018, Prague, 2018-06-03/2018-06-08. Springer Nature Singapore Pte Ltd., 2019. s. 255-259. IFMBE Proceedings. sv. 68/1. ISSN 1680-0737. ISBN 978-981-10-9034-9. DOI 10.1007/978-981-10-9035-6_46.

Nemy, M. et al. Probabilistic Fiber-tracking of the Human Cholinergic System. In: World Congress on Medical Physics and Biomedical Engineering Book of Abstracts. World Congress on Medical Physics and Biomedical Engineering 2018, Prague, 2018-06-03/2018-06-08. Rio de Janeiro: International Organization for Medical Physics, 2018. Dostupné z: http://www.iupesm2018.org/

Bakstein, E. et al. Automated atlas fitting for deep brain stimulation surgery based on microelectrode neuronal recordings. In: Lhotska, L. et al., eds. World Congress on Medical Physics and Biomedical Engineering 2018 (Vol. 3). World Congress on Medical Physics and Biomedical Engineering 2018, Prague, 2018-06-03/2018-06-08. Springer Nature Singapore Pte Ltd., 2019. s. 105-111. IFMBE Proceedings. sv. 68/3. ISSN 1680-0737. ISBN 978-981-10-9022-6. DOI 10.1007/978-981-10-9023-3_19.

Publications 2018

Adam Kulhánek, Roman Gabrhelík, Daniel Novák, Václav Burda, Håvar Brendryen. eHealth Intervention for Smoking Cessation for Czech Tobacco Smokers: Pilot Study of User Acceptance. Adiktologie. 2018, 2018(2), 81-85. ISSN 1213-3841.

Novak, P. Orientace v rozhlehlých budovách. In: GEORGI, H. a R. ŠLAMBEROVÁ, eds. Stárnutí / Ageing 2018. Ageing / Stárnutí 2018 – 4th GERONTOLOGICAL INTERDISCIPLINARY CONFERENCE, 3. lékařská fakulta, Univerzita Karlova, Praha, 2018-10-19/2018-10-20. Praha: Univerzita Karlova v Praze, 3. lékařská fakulta, 2018. s. 144-150. ISBN 978-80-87878-36-1.

Cuesta-Frau D, Novák D, Burda V, et al. Characterization of Artifact Influence on the Classification of Glucose Time Series Using Sample Entropy Statistics. Entropy. 2018, 20(871), ISSN 1099-4300. DOI 10.3390/e20110871. Dostupné z: https://www.mdpi.com/1099-4300/20/11/871/htm

Novak, P. Možnosti využití běžně dostupné techniky v oftalmologii. In: VI. Trendy v dětské oftalmologii a strabologii 2018. Evropské školící centrum YMCA, Litomyšl, 2018-10-26/2018-10-27. Prague: ČLS JEP, 2018. s. 91-93. ISSN 1213-1032.

Eduard Bakštein, Tomáš Sieger, Filip Růžička, Daniel Novák & Robert Jech Fusion of microelectrode neuronal recordings and MRI landmarks for automatic atlas fitting in deep brain stimulation surgery. In: 7th MICCAIA Workshop on Clinical Image-based Procedures – Translational Research in Medical Imaging. Granada, 2018-09-16. London: Springer, 2018. s. 175-183. ISSN 0302-9743. ISBN 978-3-030-01200-7. DOI 10.1007/978-3-030-01201-4_19.

Nemy, M. a L. Vyslouzilova. Measurement of Basal Forebrain Atrophy in Alzheimer’s Disease using Tensor-Based Morphometry: Preliminary Study. In: GEORGI, H. a R. ŠLAMBEROVÁ, eds. Ageing 2018: Proceedings of the 4th Gerontological Interdisciplinary Conference. Ageing 2018, Praha, 2018-10-19/2018-10-20. Praha: Univerzita Karlova v Praze, 3. lékařská fakulta, 2018. s. 184-193. ISBN 978-80-87878-36-1. Dostupné z: http://www.konferencestarnuti.cz/

T. Serranová, T. Sieger, F. Růžička, E. Bakštein, P. Dušek, P. Vostatek, D. Novák, E. Růžička, D. Urgošík, R. Jech . Gradient-like representation of emotional valence and arousal within the subthalamic nucleus in Parkinson’s disease. In: Abstracts of the 2018 International Congress of Parkinson’s Disease and Movement Disorders. International Congress of Parkinson’s Disease and Movement Disorders 2018, Hong Kong, 2018-10-05/2018-10-09. International Parkinson and Movement Disorder Society, 2018. sv. 33.

Eva María Cirugeda-Roldán, Antonio Molina Picó, Daniel Novák, David Cuesta-Frau, Vaclav Kremen  Sample Entropy Analysis of Noisy Atrial Electrograms during Atrial Fibrillation. Computational and Mathematical Methods in Medicine. 2018, 2018 ISSN 1748-6718. DOI 10.1155/2018/1874651. Dostupné z: https://www.hindawi.com/journals/cmmm/2018/1874651/

Publications 2017

Novak, P., Ekaputra, F.J., a Biffl, S. Generation of Simulation Models in MATLAB-Simulink Based on AutomationML Plant Description [online]. IFAC-PapersOnLine. 2017, 50(1), s. 7613-7620. ISSN 2405-8963. Dostupné z: https://www.sciencedirect.com/science/article/pii/S2405896317315082

O. Klempíř, R. Krupička, T. Sieger, R. Jech., et al. Automatic Spike Sorting Procedure Based on the Detection of the Number of Pallidal Neurons from Microrecordings in Dystonia. In: 64. SPOLEČNÝ SJEZD ČESKÉ A SLOVENSKÉ SPOLEČNOSTI PRO KLINICKOU NEUROFYZIOLOGII. 64. SPOLEČNÝ SJEZD ČESKÉ A SLOVENSKÉ SPOLEČNOSTI PRO KLINICKOU NEUROFYZIOLOGII. Clarion Congress Hotel, České Budějovice, 26.09.2017 – 27.09.2017. Prague: ČLS JEP. 2017, Dostupné z: http://www.mhconsulting.cz/cs-kongres-kongres_obecne-113.html

Fišerová J, Efenberková M, Sieger T, Maninová M, Uhlířová J, Hozák P.. Chromatin organization at the nuclear periphery as revealed by image analysis of structured illumination microscopy data. Journal of Cell Science. 2017, 130(12), s. 2066-2077. ISSN 0021-9533. Dostupné z: http://jcs.biologists.org/content/130/12/2066

Žeglitz, J., P. Posik. Linear combinations of features as leaf nodes in symbolic regression [online]. In: Proceedings of the Genetic and Evolutionary Computation Conference Companion. GECCO 2017 Genetic and Evolutionary Computation Conference. Berlín, 15.07.2017 – 19.07.2017. New York: ACM. 2017, s. 145-146. ISBN 978-1-4503-4939-0. Dostupné z: https://dl.acm.org/citation.cfm?id=3076009

Bakštein, E., Sieger, T., Wild, J., Novák, D., Schneider, J., Vostatek, P., Urgošík, D., Jech, R. Methods for automatic detection of artifacts in microelectrode recordings. Journal of Neuroscience Methods. 2017, 290s. 39-51. ISSN 0165-0270. Dostupné z: http://www.sciencedirect.com/science/article/pii/S0165027017302492?via%3Dihub

S.I. Duque, A. Orozco-Duque, V. Kremen, D. Novak, C. Tobón, J. Bustamante,Feature subset selection and classification of intracardiac electrograms during atrial fibrillation. Biomedical Signal Processing and Control. 2017, 38s. 182-190. ISSN 1746-8094. Dostupné z: http://www.sciencedirect.com/science/article/pii/S1746809417301088

Bonnet C, Rusz J, Hanuška J, Dezortová M, Jírů F, Sieger T, et al. GABA spectra and remote distractor effect in progressive supranuclear palsy: A pilot study. Revue Neurologique. 2017, 173(4), s. 225-229. ISSN 0035-3787. Dostupné z: https://doi.org/10.1016/j.neurol.2017.03.007

Tomáš Sieger, Catherine B. Hurley, Karel Fišer, Claudia Beleites, et al. Interactive Dendrograms: The R Packages idendro and idendr0. Journal of Statistical Software. 2017, 76(10), s. 1-22. ISSN 1548-7660. Available: https://www.jstatsoft.org/article/view/v076i10

Publications 2016

Kaválková P, Mráz M, Trachta P, Kloučková J, Cinkajzlová A, Lacinová Z, Haluzíková D, Beneš M, Vlasáková Z, Burda V, Novák D, et al. Endocrine effects of duodenal-jejunal exclusion in obese patients with type 2 diabetes mellitus. Journal of endocrinology. 2016, 231(1), pp. 11-22. ISSN 0022-0795.

Hellebrandová L, Chlumský J, Vostatek P, Novák D, Rýznarová Z, Bunc V. Airflow Limitation Is Accompanied by Diaphragm Dysfunction [online]. Physiological Research. 2016, 65(3), pp. 469-479. ISSN 1802-9973.

Burda, V., Novak, D.,Schneider, J. Evaluation of diabetes mellitus compensation after one year of using Mobiab system. In: 38th International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) 2016. The 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. Orlando, FL, 16.08.2016 – 20.08.2016. New York: IEEE. 2016, pp. 6002-6005. ISSN 1557-170X. ISBN 978-1-4577-0220-4. Available from: http://ieeexplore.ieee.org/document/7592096/

Eduard Bakstein, Tomas Sieger, Daniel Novak & Robert Jech. Probabilistic model of neuronal background activity in deep brain stimulation trajectories. In: HOLZINGER, A, et al., eds. Information Technology in Bio- and Medical Informatics. 7th International Conference on Information Technology in Bio- and Medical Informatics. Porto, 05.09.2016 – 08.09.2016. Basel: Springer. 2016, pp. 97-111. LNCS 9832. ISSN 0302-9743. ISBN 978-3-319-43948-8. Available from: http://link.springer.com/chapter/10.1007%2F978-3-319-43949-5_7

Pelantová H, Bártová S, Anýž J, Holubová M, Železná B, Maletínská L, Novák D, et al. Metabolomic profiling of urinary changes in mice with monosodium glutamate-induced obesity. Analytical and Bioanalytical Chemistry (print version). 2016, 2016(Volume 48), pp. 567-578. ISSN 1618-2642. Available from: http://link.springer.com/article/10.1007%2Fs00216-015-9133-0

Publications 2015

Orozco-Duque A, Novak D, Kremen V, Bustamante J. Multifractal analysis for grading complex fractionated electrograms in atrial fibrillation. Physiological Measurement. 2015, 34(11), pp. 2269-2284. ISSN 0967-3334. Available from: http://iopscience.iop.org/article/10.1088/0967-3334/36/11/2269/meta

Novak, D., Tulu, B., and Brendryen, H., eds. Handbook of Research on Holistic Perspectives in Gamification for Clinical Practice. Hershey: IGI Publishing. 2015, vol. 1. ISBN 9781466696297. Available from: http://www.igi-global.com/book/handbook-research-holistic-perspectives-gamification/

Macku, D. The Continuous Flow Total Artificial Heart in Clinical Practice. In: JAFFRAY, D.A., ed. World Congress on Medical Physics and Biomedical Engineering, June 7-12, 2015, Toronto, Canada. World Congress on Medical Physics and Biomedical Engineering. Toronto, Canada, 07.06.2015 – 12.06.2015. Cham: Springer International Publishing AG. 2015, pp. 318-321. IFMBE Proceedings. ISSN 1680-0737. ISBN 978-3-319-19387-8.

Bláha J, Mráz M, Kopecký P, Stříteský M, Lipš M, Matias M, Kunstýř J, Pořízka M, Kotulák T, Kolníková I, Šimanovská B, Zakharchenko M, Rulíšek J, Šachl R, Anýž J, Novák D, et al. Perioperative tight glucose control reduces postoperative adverse events in non-diabetic cardiac surgery patients [online]. The Journal of Clinical Endocrinology & Metabolism. 2015, Volume 100(Issue 8), pp. 3081-3089. ISSN 1945-7197. Available from: http://press.endocrine.org/doi/abs/10.1210/jc.2015-1959

Pelantová H, Bugáňová M, Anýž J, Železná B, Maletínská L, Novák D, et al. Strategy for NMR metabolomic analysis of urine in mouse models of obesity–from sample collection to interpretation of acquired data [online]. Journal of Pharmaceutical and Biomedical Analysis. 2015, 2015(115), pp. 225-235. ISSN 0731-7085. Available from: http://www.sciencedirect.com/science/article/pii/S0731708515300534

Eduard Bakštein; Jakub Schneider; Tomáš Sieger; Daniel Novák; Jiří Wild; Robert Jech. Supervised Segmentation of Microelectrode Recording Artifacts Using Power Spectral Density. In: IEEE EMBC 2015 Proceedings (Milano). 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBS). Milano, 25.08.2015 – 29.08.2015. Milano: IEEE. 2015, pp. 1524-1527. ISSN 1557-170X. ISBN 9781424492718. Available from: http://emb.citengine.com/event/embc-2015/paper-details?pdID=4502

Schneider, J., Novak, D., and Jech, R. Optimization of Parkinson Disease Treatment Combining Anti-Parkinson Drugs and Deep Brain Stimulation Using Patient Diaries. In: IEEE EMBC 2015 Proceedings (Milano). 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBS). Milano, 25.08.2015 – 29.08.2015. Milano: IEEE. 2015, pp. 3444-3447. ISSN 1557-170X. ISBN 9781424492718. Available from: http://emb.citengine.com/event/embc-2015/paper-details?pdID=4981

Cirugeda–Roldán, E.; Novak, D.; Kremen, V., et al. Characterization of Complex Fractionated Atrial Electrograms by Sample Entropy: An International Multi-Center Study [online]. Entropy. 2015, 17(11), pp. 7493-7509. ISSN 1099-4300. Available from: http://www.mdpi.com/1099-4300/17/11/7493/pdf

Zegklitz J, Posik, P. Model Selection and Overfitting in Genetic Programming: Empirical Study [online]. In: Proceedings of the Companion Publication of the 2015 on Genetic and Evolutionary Computation Conference (GECCO 2015). GECCO 2015 Genetic and Evolutionary Computation Conference. Madrid, 11.07.2015 – 15.07.2015. New York: ACM. 2015, pp. 1527-1528. ISBN 978-1-4503-3488-4. Available from: http://dl.acm.org/citation.cfm?id=2764678&CFID=715756301&CFTOKEN=65340477

Hanuška J, Bonnet C, Rusz J, Sieger T, et al. Fast vergence eye movements are disrupted in Parkinson’s disease: A video-oculography study. Parkinsonism & Related Disorders. 2015, 21(7), pp. 797-799. ISSN 1353-8020. Available from: http://www.sciencedirect.com/science/article/pii/S1353802015001625

Sieger T, Serranová T, Růžička F, Vostatek P, Wild J, Štastná D, Bonnet C, Novák D, et al. Distinct populations of neurons respond to emotional valence and arousal in the human subthalamic nucleus. Proceedings of the National academy of sciences of the United Stated of America. 2015, 112(10), pp. 3116-3121. ISSN 0027-8424. Available from: http://www.pnas.org/cgi/doi/10.1073/pnas.1410709112

Carmen Camara, Pedro Isasi, Kevin Warwick, Virginie Ruiz, Tipu Aziz, John Stein, Eduard Bakštein. Resting tremor classification and detection in Parkinson’s disease patients. Biomedical Signal Processing and Control. 2015, 16pp. 88-97. ISSN 1746-8094. Available from: http://www.sciencedirect.com/science/article/pii/S1746809414001414

Smejkal Vladimir, Jindřich Kodl, Jindřich Kodl Jr., Daniel Novák & Jakub Schneider . Strong Identification and Authentication Using Dynamic Biometric Signature. In: Computer Science and its Applications. The 2014 International Conference on Advanced Information Technology and Services. Taipei, 16.09.2014 – 18.09.2014. Heidelberg: Springer. 2015, pp. 1245-1252. ISSN 1876-1100. ISBN 978-3-662-45401-5.

Hrbáček J, Minárik I, Sieger T, Babjuk MExternal validation of extended prostate biopsy nomogram. Central European Journal of Urology (CEJU), an open access Journal. 2015, 2015(68(2)), pp. 148-152. ISSN 2080-4806. Available from: http://www.termedia.pl/External-validation-of-extended-prostate-biopsy-nomogram,57,25356,1,1.html

Baudis, P. , Posik, P. Global Line Search Algorithm Hybridized with Quadratic Interpolation and Its Extension to Separable Functions. In: GECCO ’15 Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation. GECCO 2015 Genetic and Evolutionary Computation Conference. Madrid, 11.07.2015 – 15.07.2015. New York: ACM Press. 2015, pp. 257-264. ISBN 978-1-4503-3472-3. Available from: http://dx.doi.org/10.1145/2739480.2754717